BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011G11SP1|AL426272
(724 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1482 1433 0.0
>3x_Contig1482
Length = 10060
Score = 1433 bits (722), Expect = 0.0
Identities = 722/722 (100%)
Strand = Plus / Plus
Query: 3 taacccacaatgtggatgctatttttactttacttctcgccccatcaaccctatgacaac 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1887 taacccacaatgtggatgctatttttactttacttctcgccccatcaaccctatgacaac 1946
Query: 63 atgataaaacacatcgaacatagatatatgtatgtatgtatctctttttatatccaattg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1947 atgataaaacacatcgaacatagatatatgtatgtatgtatctctttttatatccaattg 2006
Query: 123 catttcgtttctctatgacagatattcccccataagatttaaatgaccaaaatcagacct 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2007 catttcgtttctctatgacagatattcccccataagatttaaatgaccaaaatcagacct 2066
Query: 183 tttttcctattaacaacaggttcggaaaaggggacgccaagtaaagcacttttgacacca 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2067 tttttcctattaacaacaggttcggaaaaggggacgccaagtaaagcacttttgacacca 2126
Query: 243 tttaaagtgcgcctggtgcatatactgcgagtgttcgtttaagacagggaaatgacaatt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2127 tttaaagtgcgcctggtgcatatactgcgagtgttcgtttaagacagggaaatgacaatt 2186
Query: 303 cagatagtggattcggttgaaaataggtcattcgacaactatgtaacgattaagttgaat 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2187 cagatagtggattcggttgaaaataggtcattcgacaactatgtaacgattaagttgaat 2246
Query: 363 gactcgttgtatttattccatctagtctatttgagagacaactgtaccggcaaagaaagc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2247 gactcgttgtatttattccatctagtctatttgagagacaactgtaccggcaaagaaagc 2306
Query: 423 ttccatggtgaaacacatcagagactgattgatatcttcaacgatatcgatttggagaaa 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2307 ttccatggtgaaacacatcagagactgattgatatcttcaacgatatcgatttggagaaa 2366
Query: 483 gatttgaatggtactgtcgttgttgaaggtgatgaattggttgtgaaatggttcgacggt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2367 gatttgaatggtactgtcgttgttgaaggtgatgaattggttgtgaaatggttcgacggt 2426
Query: 543 catatttcaagattcacggaaagatggctcttgaaccacgcatattatccagagaagaac 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2427 catatttcaagattcacggaaagatggctcttgaaccacgcatattatccagagaagaac 2486
Query: 603 gttatcaataacaaagcagttaagttgcccaatcgcatcacctggtgcaagcaagaattt 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2487 gttatcaataacaaagcagttaagttgcccaatcgcatcacctggtgcaagcaagaattt 2546
Query: 663 aatgaattgaaacaagctagcgatcactttaagaatgactacaatcatattaacgatgat 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2547 aatgaattgaaacaagctagcgatcactttaagaatgactacaatcatattaacgatgat 2606
Query: 723 tc 724
||
Sbjct: 2607 tc 2608
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5740
Number of Sequences: 1807
Number of extensions: 5740
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 724
length of database: 10,358,551
effective HSP length: 16
effective length of query: 708
effective length of database: 10,329,639
effective search space: 7313384412
effective search space used: 7313384412
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)